I know that organic and living is not the same thing, but a ship would not need to be living to pilot itself. Even humans got autopilot. I'm sure a organic ship would be able to Fight on its own if "programmed" to do so, much better than a hellcat a ferret or even a vampire.
The shadows in B5 used telepats as pilots for their ships, but they still had to "merge" with the ship. In babylon 5 shadow ship could move unlimited. while nephilim fighters
Have to be close to their carrier, and could receive new instruction or even be remote controlled from the capship itself if the programming wasnt sufficient.